Denovolyzer

An R package for statistical analyses of de novo genetic variants

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denovolyzeR: an R package for the statistical analysis of de novo variants

This repository is the home of denovolyzeR, an R implementation of a statistical framework for the analysis of de novo genetic variants.

The statistical framework is published in Nature Genetics

To install from GitHub using devtools:

## Check whether devtools is installed
"devtools" %in% installed.packages()

## install devtools if required
install.packages("devtools")

## install denovolyzeR
library(devtools)
install_github("jamesware/denovolyzeR")

Alternative mutational probability tables for use with denovolyzeR can be downloaded from here